Safe Haskell	Safe
Language	Haskell98

Bio.RNAcodeData

Description

This module contains a hierarchical data structure for RNAcode output For more information on RNAcode consult: http://wash.github.io/rnacode/

Synopsis

Documentation

All elements of RNAcode output are contained in this datatype

Constructors

RNAcode
Fields rnacodeHits :: [RNAcodeHit] rcAlignmentNumber :: Maybe Int rcTime :: Maybe Double rcSampleNumber :: Maybe Int rcDelta :: Maybe Double rcBigOmega :: Maybe Double rcSmallOmega :: Maybe Double rcStopPenalty :: Maybe Double

Instances

Eq RNAcode #
Instance details Defined in Bio.RNAcodeData Methods (==) :: RNAcode -> RNAcode -> Bool # (/=) :: RNAcode -> RNAcode -> Bool #
Show RNAcode #
Instance details Defined in Bio.RNAcodeData Methods showsPrec :: Int -> RNAcode -> ShowS # show :: RNAcode -> String # showList :: [RNAcode] -> ShowS #

RNAcode Hit

Constructors

RNAcodeHit
Fields hss :: Int strand :: Char frame :: Int hitLength :: Int from :: Int to :: Int name :: String start :: Int end :: Int score :: Double pvalue :: Double

Instances

Eq RNAcodeHit #
Instance details Defined in Bio.RNAcodeData Methods (==) :: RNAcodeHit -> RNAcodeHit -> Bool # (/=) :: RNAcodeHit -> RNAcodeHit -> Bool #
Show RNAcodeHit #
Instance details Defined in Bio.RNAcodeData Methods showsPrec :: Int -> RNAcodeHit -> ShowS # show :: RNAcodeHit -> String # showList :: [RNAcodeHit] -> ShowS #