hyraxAbif-0.2.3.10: Modules for parsing, generating and manipulating AB1 files.
This library provides functionality for parsing, modifying, writing and generating ABIF files
Any AB1 file conforming to the standard at http://www6.appliedbiosystems.com/support/software_community/ABIF_File_Format.pdf should be supported.
This library also support generating a minimal ABIF file from a FASTA input sequence.
A basic terminal application that can dump and generate AB1s is included. See https://github.com/hyraxbio/hyraxAbif/blob/master/app/Main.hs
See
- Hyrax.Abif.Generate for generate ABIF files from FASTA inputs
- Hyrax.Abif.Read for parsing ABIF files
- Hyrax.Abif.Write for creating/updating ABIF files
- Hyrax.Abif for the core types
- Examples for examples
Signatures
Modules
- Examples
- Examples.AddComment Example showing how to add a comment to an existing AB1 file
- Examples.ReadAb1 Example of reading a ABIF file
- Examples.RemoveComments Example showing how to remove all comments from an ABIF file
- Hyrax
- Hyrax.Abif Core AB1 types
- Hyrax.Abif.Fasta Read a FASTA file
- Hyrax.Abif.Generate Generate AB1 from a weighted FASTA
- Hyrax.Abif.Read Read and parse AB1 files
- Hyrax.Abif.Write Functionality for writing AB1 files
- Hyrax.Abif Core AB1 types